31 primates Cactus

This alignment has been generated in Ensembl release 113 and is composed of 1,134,431 blocks (up to 173,099 bp long).

API access

This alignment set can be accessed using the Compara API via the Bio::EnsEMBL::DBSQL::MethodLinkSpeciesSetAdaptor using the method_link_type "CACTUS_DB" and the species_set_name "primates".

SpeciesAssemblyGenome length (bp)Genome coverage (bp)Genome coverage (%)Coding exon length (bp)Coding exon coverage (bp)Coding exon coverage (%)
Human (Homo sapiens)GRCh383,099,750,7182,722,174,18187.8238,571,75436,929,29695.74

Block size distribution

Size range All 1,134,431 alignment blocks
# blocks Total size (incl. gaps)
10 bp - 100 bp
63,840
2.9 Mb
100 bp - 1 kb
199,774
100.6 Mb
1 kb - 10 kb
748,794
3.1 Gb
10 kb - 100 kb
122,016
1.9 Gb
100 kb - 1 Mb
7
864.8 kb